Creamy Butternut Squash Pasta Bake Recipe

Cheesy Butternut Squash Pasta bake with kale and mushrooms in casserole dish.

This Cheesy Butternut Squash Pasta Bake is a cozy, satisfying dinner that’s perfect for cool evenings. It pairs roasted squash and earthy mushrooms with a garlic-sage cream sauce, tender pasta, melty cheddar and mozzarella, plus crunchy walnut-panko breadcrumbs. The result is comforting, flavorful, and ideal for feeding a family or serving at holiday gatherings.

For more popular vegetarian pasta ideas, try recipes such as Peppery Pumpkin Orzo, Mushroom Miso Pasta, Mushroom Stroganoff, or Veggie Sausage & Brussels Sprouts Pasta.

Why you’ll love this recipe

  • Hearty and satisfying: This casserole combines pasta, roasted vegetables and plenty of cheese for a filling main course.
  • Seasonal flavors: Butternut squash, sage, kale and mushrooms make this a perfect fall and winter dish.
  • Vegetarian and crowd-friendly: It’s a great centerpiece for a meat-free meal and easy to scale up for guests.
  • Make-ahead friendly: The components can be prepared in advance and assembled before baking, which makes weeknight cooking and entertaining easier.
Butternut squash pasta in a casserole dish before adding cheese.
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Ingredients (and substitutes)

This vegetarian pasta bake is loaded with vegetables, aromatic herbs and two kinds of cheese. Below are the main ingredients and easy swaps if needed.

Ingredients to make vegetarian Cheesy Butternut Squash baked pasta.
  • Pasta: Rigatoni or penne are ideal because their shape holds the sauce. Any medium-sized dried pasta will work.
  • Butternut squash: About 1½ lb (roughly a small squash). Pumpkin or another roasting squash can be substituted.
  • Mushrooms: Cremini and shiitake add savory depth, but use your favorites or omit if you prefer.
  • Broth: Vegetable broth deepens the flavor; chicken broth is fine if you’re not vegetarian.
  • Kale: Curly kale gives color and texture. Lacinato kale or fresh spinach can be used instead.
  • Cheese: A mix of aged cheddar (for flavor) and low-moisture mozzarella (for melt) creates the best texture and taste.
  • Walnuts & panko: Toasted walnuts mixed with panko make a crunchy topping; pecans are a good substitute or omit for nut allergies.

The full ingredient amounts and step-by-step instructions are provided in the recipe card below.

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How to make (step-by-step photos)

The bake has a few parts—roasting the vegetables, making the garlic-sage sauce, cooking the pasta, toasting breadcrumbs, and finally assembling and baking—but each step is straightforward. Roast the squash and mushrooms until caramelized, prepare the sauce and toss with slightly undercooked pasta, stir in the greens and roasted veg, layer with cheese, and finish in the oven.

Oil drizzling over butternut squash, mushrooms, and onion on baking sheets.
1. Toss squash, onion and mushrooms with olive oil, salt and pepper; roast until golden.
Garlic herb pasta sauce being stirred in a pot.
2. Make a simple garlic and sage white sauce for the pasta.
Cooked pasta being added to a pot of garlic herb sauce.
3. Mix the cooked pasta into the sauce so every piece is coated.
Roasted butternut squash, mushrooms, and kale being stirred into a pot of pasta.
4. Stir in the kale and roasted vegetables so they’re evenly distributed.
Butternut squash pasta being topped with cheese in a casserole dish.
5. Layer half the pasta and half the cheese in a casserole, then repeat.
Sprinkling panko breadcrumbs over Cheesy Butternut Squash Pasta Bake.
6. Bake until bubbly and golden, then finish with crunchy walnut-panko breadcrumbs.

The complete recipe card below lists all ingredient quantities and step-by-step instructions.

Tips

  • Undercook the pasta slightly: Boil the pasta for about 2 minutes less than the package al dente time so it stays firm after baking.
  • Keep it saucy: The casserole should start with a generous amount of sauce because the pasta absorbs liquid in the oven.
  • Make-ahead: Cool the sauce and pasta separately, then combine and assemble the casserole (leave the breadcrumbs separate). Cover and refrigerate up to 2 days; bring to room temperature while the oven preheats, then bake.
  • Serving suggestions: Serve with a fresh green salad, a simple soup, or roasted seasonal vegetables for a complete meal.
Butternut Squash Baked Pasta in a casserole dish on a dinner table.
Vegetarian Cheese and Butternut Squash Pasta Bake with mushrooms and kale.

More vegetarian pasta recipes:

  • Butternut Squash Pasta with Toasted Breadcrumbs
  • Spicy Sausage and Brussels Sprouts Pasta
  • Mushroom Miso Pasta (Without Cream)
  • One Pot Tomato Harissa Orzo Pasta

Love this recipe? Please leave a 5-star review and share how it turned out!

📖 Recipe

Cheesy Butternut Squash Pasta Bake

A creamy, savory vegetarian pasta bake featuring roasted butternut squash, mushrooms, kale, garlic-sage sauce, shredded cheddar and mozzarella, and a crisp walnut-panko topping. Serves approximately 8 and reheats well for leftovers.
Prep Time 15 minutes
Cook Time 40 minutes
Total Time 55 minutes
Servings 8
Author: Bri Beaudoin

Ingredients

Roasted Veggies

  • 1½ lb cubed butternut squash (½-inch / 1.25 cm cubes, about 5 cups)
  • 1 large yellow onion, diced (about 2 cups)
  • 3 cups chopped mushrooms (cremini, shiitake, or a mix)
  • 1 tablespoon extra virgin olive oil, plus extra for roasting
  • ½ teaspoon fine sea salt
  • ¼ teaspoon black pepper

Crispy Walnut Breadcrumbs

  • 1 tablespoon extra virgin olive oil
  • ⅓ cup panko breadcrumbs
  • ¼ cup chopped walnuts (raw and unsalted)

Pasta and Sauce

  • 1 lb dried rigatoni or penne
  • 3 tablespoons extra virgin olive oil
  • 4 cloves garlic, minced
  • ⅓ cup all-purpose flour
  • 3 cups milk
  • 2 cups vegetable broth
  • 1 teaspoon dried sage
  • 1 tablespoon fresh thyme leaves
  • 1 teaspoon fine sea salt
  • ¼ teaspoon black pepper
  • 3 cups chopped kale (see notes)
  • 2 cups shredded aged cheddar
  • 1½ cups shredded low-moisture mozzarella

Instructions

  1. Preheat: Place oven racks in the upper and lower thirds and heat the oven to 425°F (220°C).
  2. Roast the vegetables: Line two baking sheets with parchment. Spread the cubed butternut squash on one sheet and the diced onion plus mushrooms on the other. Drizzle with olive oil, season with salt and pepper, and toss to coat. Place the squash on the upper rack and roast until golden and tender, about 25 minutes.
  3. Cook the pasta: While the vegetables roast, bring a large pot of salted water to a boil and cook the pasta for about 2 minutes less than the package’s al dente time. Drain and set aside.
  4. Make the walnut breadcrumbs: In a large pot (big enough for pasta and sauce), warm 1 tablespoon olive oil over medium-low heat. Add the panko and chopped walnuts and cook, stirring, until golden, 4–6 minutes. Transfer to a small bowl and season with salt and pepper to taste.
  5. Start the sauce: Wipe the pot clean, then warm 3 tablespoons olive oil over medium heat. Add the minced garlic and cook until fragrant and light golden, about 2 minutes. Stir in the flour to form a roux, then whisk in the milk and vegetable broth. Add dried sage, fresh thyme, salt and pepper. Bring to a gentle simmer, then cook, stirring, until the sauce thickens slightly and coats the back of a spoon, 1–3 minutes. Reduce heat to low.
  6. Combine: Add the cooked pasta to the sauce and stir to coat. Fold in the chopped kale and the roasted squash, mushrooms and onion. The mixture should be generously saucy.
  7. Assemble and bake: Combine the shredded cheddar and mozzarella in a bowl. Transfer half the pasta mixture into a 9×13-inch (23×33 cm) casserole dish, sprinkle with half the cheese, then add the remaining pasta and top with the remaining cheese. Bake on the upper rack until bubbling and golden, 10–15 minutes. Sprinkle with the walnut-panko crumbs and serve hot.

Notes

  1. Walnuts: Pecans can be used instead, or omit the nuts if there is an allergy.
  2. Thyme: Fresh thyme gives a milder, brighter flavor. If using dried thyme, use about one-third the amount.
  3. Kale: Curly kale offers a vivid color and texture; lacinato kale or spinach are acceptable swaps.
  4. Mozzarella: Use low-moisture (pizza) mozzarella rather than fresh mozzarella to avoid excess moisture in the bake.
  5. Rack position: The top rack helps the cheese brown. If your casserole is deep, you may need to lower the rack slightly during baking.
  6. Make ahead: Cool sauce and pasta before combining, assemble the casserole (without breadcrumbs), cover tightly and refrigerate up to 2 days. Allow to sit at room temperature while the oven preheats, then bake as directed. Toast the breadcrumbs just before serving for best texture.
  7. Storage & reheating: Leftovers keep in the refrigerator for up to 3 days. Reheat in the microwave or in a 350°F (177°C) oven covered with foil until warmed through.

Nutrition (per serving)

Calories: 659 kcal | Carbohydrates: 73 g | Protein: 27 g | Fat: 30 g | Saturated Fat: 12 g | Sodium: 952 mg | Fiber: 7 g | Sugar: 12 g | Vitamin A: 10447 IU | Vitamin C: 29 mg | Calcium: 515 mg | Iron: 3 mg

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